PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG026110.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 320aa    MW: 34771.9 Da    PI: 6.6233
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG026110.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK35.51.9e-111213252
            RWP-RK 32 LKriCRqyGIkRWPhRkiksl 52
                      +KriCRq+GI+RWP+Rki+++
  TRIDC3BG026110.6  1 MKRICRQHGISRWPSRKINKV 21
                      7******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MKRICRQHGI SRWPSRKINK VNRSLSKLKQ VIESVQGSDA AFNLTSITGP LPTIPVGPSS  60
DSFNKEKASE SKAEHSNRAV DGDRDSSLQK SQENGSHFGA LMSQQGFADT GNNVQLEADK  120
ASLSRSSSGE GSINSRTSEG SCQGSPTNQT FVCQPIASMF LEPQEPQLNP EGFTKEPFQE  180
PELPLSRMLI EDSGSSKDLK NLFGSAIGQP MLAPPSNFGP MRNSGTVTIK ASFKEDIVRF  240
RFQCSSSVMA LKDEVAKRLR MDAGMFDIKY LDDDHEWVKL ACNADLEECI EISRHSGTHV  300
IRLLVSDVAA HIGSSCGSSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.19e-42Nin-like family protein