PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG016300.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 227aa MW: 25650.8 Da PI: 8.641 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.8 | 5.7e-21 | 90 | 150 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le +F++ n +ps++++++++++l +++e++V++WFqNrRa+ k+ TRIDC3BG016300.3 90 RQRWTPTQMQLQILEIVFNQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 150 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 100 | 1.8e-32 | 89 | 152 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe ++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq TRIDC3BG016300.3 89 ARQRWTPTQMQLQILEIVFNQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 152 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
TSQAVAMSSS GKFLARCISQ SWLRHCVKVM TDEQMEVLRK QISIYATICE QLVEMHRALT 60 AHQDSIAGMS LGNLYCDPLM VHGGQKITAR QRWTPTQMQL QILEIVFNQG NGTPSKQKIK 120 DITAELSQHG QISETNVYNW FQNRRARSKR KQAASSLPNN AESEAEGDEE SLTDKKPRSD 180 GSQQQNMAVR AHNPERISEM HRHFDAAERE QVRGPMMYGS SNDTSRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 144 | 152 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 6e-59 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG016300.3 |