PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG016300.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 214aa MW: 24283.3 Da PI: 8.7484 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.4 | 3.8e-21 | 78 | 138 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F++ n +ps++++++++++l +++e+++++WFqNrRa+ k+ TRIDC3BG016300.11 78 RQRWTPTQMQLQILESIFNQgNGTPSKQKIKDITAELsqhgQISETNIYNWFQNRRARSKR 138 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 101.5 | 6e-33 | 77 | 140 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++N+++WFQNr+aR+++kq TRIDC3BG016300.11 77 ARQRWTPTQMQLQILESIFNQGNGTPSKQKIKDITAELSQHGQISETNIYNWFQNRRARSKRKQ 140 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
FLARCISQSW LRHCVKVMTD EQMEVLRKQI SIYATICEQL VEMHRALTAH QDSIAGMSLG 60 NLYCDPLMVH GGQKITARQR WTPTQMQLQI LESIFNQGNG TPSKQKIKDI TAELSQHGQI 120 SETNIYNWFQ NRRARSKRKQ AASSLPNNAE SEAEGDEESP TDKKPRSDGS QQQNMAVRAH 180 NLKRISEMHR HFDAAERGHV CGPTMYGSSN DTSR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 140 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 4e-59 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG016300.11 |