PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061680.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 322aa    MW: 33529.8 Da    PI: 6.7241
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061680.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP122.84e-3887161377
               TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaes 77 
                       +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t++WLlqqa+pai ++tgt++++as+ ++++
  TRIDC3AG061680.3  87 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALSSVA 161
                       6999***************************************************************97663222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDPKFPPPPP LNKAEPTSAA TATTTSSTST PPQEQQPPQH QQHLQIQVHQ QQEDGGGGGG  60
GGKEQQQQQV VVAAAAAGDR RVQALGPKRS SNKDRHTKVD GRGRRIRMPA LCAARIFQLT  120
RELGHKSDGE TVQWLLQQAE PAIVAATGTG TIPASALSSV APSLPSPTSA LAGRPHHHHH  180
MWGPPPASAG FSQAGFMNSS GADGGGIGGL MQRIGLPAGI ELPGGGAGGM GGHIGFAPMF  240
AGHAAAAIPG LELGLSQEGH IGVLSQFYHQ VGGAAGASGQ LQHPHPHQHH HHEQHHHQQQ  300
QQQQEDGEDE REDGDSEEES GQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.12e-39TCP family protein