PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061680.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 323aa    MW: 34236.6 Da    PI: 6.8279
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061680.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP122.84e-3888162377
               TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaes 77 
                       +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t++WLlqqa+pai ++tgt++++as+ ++++
  TRIDC3AG061680.2  88 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETVQWLLQQAEPAIVAATGTGTIPASALSSVA 162
                       6999***************************************************************97663222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDPKFPPPPP LNKAEPTSAA TATTTSSTST PPAQQQHQQL DREQYRHPPQ QQEQQPPQHQ  60
QHLQEQQQQQ VVVAAAAAGD RRVQALGPKR SSNKDRHTKV DGRGRRIRMP ALCAARIFQL  120
TRELGHKSDG ETVQWLLQQA EPAIVAATGT GTIPASALSS VAPSLPSPTS ALAGRPHHHH  180
HMWGPPPASA GFSQAGFMNS SGADGGGIGG LMQRIGLPAG IELPGGGAGG MGGHIGFAPM  240
FAGHAAAAIP GLELGLSQEG HIGVLSQFYH QVGGAAGASG QLQHPHPHQH HHHEQHHHQQ  300
QQQQQEDGED EREDGDSEEE SGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.12e-39TCP family protein