PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG061440.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 215aa    MW: 23379 Da    PI: 10.5289
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG061440.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.26.9e-2659108251
                       ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       rie+ + rqv fskRr+g++KKA+EL vLCdaeva+++fs+ gklyey+s
  TRIDC3AG061440.2  59 RIEDRTSRQVRFSKRRAGLFKKAFELVVLCDAEVALLVFSPAGKLYEYAS 108
                       8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
SSPTVADPSQ SSPPRLAPPR HTPLPLATTE IQKQSERRAA DGGEETGGMA RRGRVELRRI  60
EDRTSRQVRF SKRRAGLFKK AFELVVLCDA EVALLVFSPA GKLYEYASSS IEGTYDRYQR  120
FAGAGTNVNG GDASSNNDGD PSNIQSTLKE IASWSIQNNA DVSDANKLEK LEKLLTDALR  180
NTKSKKMLVQ QNSGASTRGG ENSNGPRGQK KRGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.16e-31MIKC_MADS family protein