PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG051570.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 290aa    MW: 32384.7 Da    PI: 9.7505
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG051570.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox38.91.4e-124098457
                      -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                       + +t+eql +Le l+++  r+p+aee+ +  ++l     ++ ++V+ WFqN+  + ++
  TRIDC3AG051570.3 40 HWVPTREQLAVLEGLYRQgMRTPTAEEIHQVMARLqehgPIDGKNVFHWFQNQQVRLRQ 98
                      699**************99****************99999************9888775 PP
2Wus_type_Homeobox87.61.3e-283899364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +t W Pt eQ+ +Le ly++G+rtP++eei+++ a+L+e+G i++kNVf+WFQN++ R rq+
   TRIDC3AG051570.3 38 NTHWVPTREQLAVLEGLYRQGMRTPTAEEIHQVMARLQEHGPIDGKNVFHWFQNQQVRLRQR 99
                       689*********************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MESVDHHDKA ATRLSLSPPH PPAPLSLTPS PNSAALVNTH WVPTREQLAV LEGLYRQGMR  60
TPTAEEIHQV MARLQEHGPI DGKNVFHWFQ NQQVRLRQRE KRQRSDYFAR QFRRPHPLPV  120
LHSPSGHPIS PVQLQAPPAP NTPTCNGEAM YMQQPCYMSG PAAQPVANAT YYSQMQPPIM  180
YPSVEMMGHG NVHAQAHAAM YYQAASPNNS NTQQMCVLQL PPAAGSYDTP DAYSHSPVLL  240
NLFPQYPTFA NRKKTRRVGS VGSARPSTSR SISWETESPK IPNRHIVVNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.11e-23WOX family protein