PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG051560.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 181aa MW: 20174.7 Da PI: 10.7375 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.9 | 1.1e-15 | 42 | 102 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHH.HHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNr.Rakekk 57 R+ +t+eq+ +Le l+++ r+p+aee+ + +++l ++ ++V++WFqN R+k+k+ TRIDC3AG051560.2 42 ARWVPTREQIAVLEGLYRQgMRTPTAEEIHQVTARLqehgPIEGKNVFYWFQNGlRQKQKQ 102 7*****************99****************99999************55888886 PP | |||||||
2 | Wus_type_Homeobox | 92.8 | 3.2e-30 | 41 | 102 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW Pt eQi +Le ly++G+rtP++eei+++ta+L+e+G ie+kNVfyWFQN R++qkq TRIDC3AG051560.2 41 NARWVPTREQIAVLEGLYRQGMRTPTAEEIHQVTARLQEHGPIEGKNVFYWFQNG-LRQKQKQ 102 78****************************************************6.4566554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MESVEHHDEA ATGLSLSPPP TSAPLSPPIS PNSAAVAALA NARWVPTREQ IAVLEGLYRQ 60 GMRTPTAEEI HQVTARLQEH GPIEGKNVFY WFQNGLRQKQ KQQQQQRSDY FARQIHRPQP 120 LPTLRRTPGN SFSPVQLQAP PAPNTPACNR EGTSAHKPSP FMRSARHLIK SAFGNWHARL 180 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59340.1 | 7e-23 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG051560.2 |