PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG049280.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 242aa MW: 27312.4 Da PI: 6.7248 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.2 | 2.2e-21 | 70 | 130 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k+ TRIDC3AG049280.2 70 RQRWTPTQMQLQILESIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSKR 130 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 103.4 | 1.6e-33 | 69 | 132 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR+++kq TRIDC3AG049280.2 69 ARQRWTPTQMQLQILESIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQ 132 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
GEALGYVKVM TDEQMEVLRK QISIYATICE QLVEMHRALT AHQDSIAGMR LGNLYCDPLM 60 VHGGHKITAR QRWTPTQMQL QILESIFDQG NGTPSKQKIK DITAELSQHG QISETNVYNW 120 FQNRRARSKR KQAASSLPSN TESEAEGDED SPTDKKPRSD GSQQQGMAVR AHNPERISEM 180 HRHFDAAERE QVRGPMYGSS NDNGPRPSGG LGQMSFYENV MSNPRIDQFF QYRTGESFDM 240 SG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 132 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 2e-62 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG049280.2 |