PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 913aa MW: 100227 Da PI: 6.2148

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5e-29	563	614	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3AG021790.2 563 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 614 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 913 aa Download sequence
DSLTTSLFFS SVSSSPPLHP LPVASSSWLT PPSPLWLFED RQMMPIEVGP APAAAPDNTA 60 AVPEETQRAR SGNSDTPIKK TERLNNKWQF NLALHDDSTN SSCLFKEKLT HALRYFKEST 120 DQHLLVQVWA PVKSGDRYVL TTSGQPFVLD HQSIGLLQYR AVSMMYMFSV DGDNAGELGL 180 PGRVYKQKVP EWTPNVQYYS STEYPRLNHA ISYNVHGTVA LPVFDPSVQS CIAVVELIMT 240 SKKINYADEV DKVCKALEAV NLKSTEILEH PNVQICNEGR QSALVEILEI LTVVCEEHKL 300 PLAQTWVPCK YRSVLAHGGG VKKSCLSFDG SCMGEVCMST SDVAFHVIDA HMWGFRDACV 360 EHHLQKGQGV SGKAFIYHRP CFSKDISQFC KLEYPLVHYA RMFGLAGCFA ICLQSPYTGD 420 DYYMLEFFLP PSCKEEDDQN ALLESILGLI NQCLRNLKVA GNGESNEASL QLSNVIMIES 480 EDFKTNVHFE NSEGFRESPE GDTHGGAHEF DKANSKVSEG HLLADDNSQN NGVSVSRPNG 540 SAASDSSLLH KNGKPPERRR GKAEKTISLE VLQQYFSGSL KNAAKSLGVC PTTMKRICRQ 600 HGISRWPSRK INKVNRSLSK LKQVIESVQG SDAAFNLTSI TGPLPTIPVG PSSDSFNKEK 660 ASESKAEHSN RAVDGDRDSS LQKPQENGSH FGALMSQQGF ADTGNNVQLE ADKASLSRSS 720 SGEGSINSRT SEGSCQGSPA NQTFVCQPIA SMFLEPQEPQ LNPEGFTKEP FQEPELPLSR 780 MLIEDSGSSK DLKNLFGSAI GQPMLAPPSN FGPMRNSGTV TIKASFKEDI VRFRFPCSSS 840 VMALKDEVAK RLRMDAGMFD IKYLDDDHEW VKLACNADLE ECIEISRHSG THVIRLLVTD 900 VAAHIGSSCG SSG

Sequence ? help Back to Top

Protein Sequence Length: 913 aa Download sequence

DSLTTSLFFS SVSSSPPLHP LPVASSSWLT PPSPLWLFED RQMMPIEVGP APAAAPDNTA  60
AVPEETQRAR SGNSDTPIKK TERLNNKWQF NLALHDDSTN SSCLFKEKLT HALRYFKEST  120
DQHLLVQVWA PVKSGDRYVL TTSGQPFVLD HQSIGLLQYR AVSMMYMFSV DGDNAGELGL  180
PGRVYKQKVP EWTPNVQYYS STEYPRLNHA ISYNVHGTVA LPVFDPSVQS CIAVVELIMT  240
SKKINYADEV DKVCKALEAV NLKSTEILEH PNVQICNEGR QSALVEILEI LTVVCEEHKL  300
PLAQTWVPCK YRSVLAHGGG VKKSCLSFDG SCMGEVCMST SDVAFHVIDA HMWGFRDACV  360
EHHLQKGQGV SGKAFIYHRP CFSKDISQFC KLEYPLVHYA RMFGLAGCFA ICLQSPYTGD  420
DYYMLEFFLP PSCKEEDDQN ALLESILGLI NQCLRNLKVA GNGESNEASL QLSNVIMIES  480
EDFKTNVHFE NSEGFRESPE GDTHGGAHEF DKANSKVSEG HLLADDNSQN NGVSVSRPNG  540
SAASDSSLLH KNGKPPERRR GKAEKTISLE VLQQYFSGSL KNAAKSLGVC PTTMKRICRQ  600
HGISRWPSRK INKVNRSLSK LKQVIESVQG SDAAFNLTSI TGPLPTIPVG PSSDSFNKEK  660
ASESKAEHSN RAVDGDRDSS LQKPQENGSH FGALMSQQGF ADTGNNVQLE ADKASLSRSS  720
SGEGSINSRT SEGSCQGSPA NQTFVCQPIA SMFLEPQEPQ LNPEGFTKEP FQEPELPLSR  780
MLIEDSGSSK DLKNLFGSAI GQPMLAPPSN FGPMRNSGTV TIKASFKEDI VRFRFPCSSS  840
VMALKDEVAK RLRMDAGMFD IKYLDDDHEW VKLACNADLE ECIEISRHSG THVIRLLVTD  900
VAAHIGSSCG SSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021790.2