PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021790.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 926aa MW: 101916 Da PI: 6.4491

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021790.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.1e-29	576	627	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3AG021790.1 576 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 627 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 926 aa Download sequence
LWPFDSLTTS LFFSSVSSSP PLHPLPVASS SWLTPPSPLW LFEDRQMMPI EVGPAPAAAP 60 DNTAAVPEET QRARSVNKLY GSRKRNSDTP IKKTERLNNK WQFNLALHDD STNSSCLFKE 120 KLTHALRYFK ESTDQHLLVQ VWAPVKSGDR YVLTTSGQPF VLDHQSIGLL QYRAVSMMYM 180 FSVDGDNAGE LGLPGRVYKQ KVPEWTPNVQ YYSSTEYPRL NHAISYNVHG TVALPVFDPS 240 VQSCIAVVEL IMTSKKINYA DEVDKVCKAL EAVNLKSTEI LEHPNVQICN EGRQSALVEI 300 LEILTVVCEE HKLPLAQTWV PCKYRSVLAH GGGVKKSCLS FDGSCMGEVC MSTSDVAFHV 360 IDAHMWGFRD ACVEHHLQKG QGVSGKAFIY HRPCFSKDIS QFCKLEYPLV HYARMFGLAG 420 CFAICLQSPY TGDDYYMLEF FLPPSCKEED DQNALLESIL GLINQCLRNL KVAGNGESNE 480 ASLQLSNVIM IESEDFKTNV HFENSEGFRE SPEGDTHGGA HEFDKANSKV SEGHLLADDN 540 SQNNGVSVSR PNGSAASDSS LLHKNGKPPE RRRGKAEKTI SLEVLQQYFS GSLKNAAKSL 600 GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKQVIES VQGSDAAFNL TSITGPLPTI 660 PVGPSSDSFN KEKASESKAE HSNRAVDGDR DSSLQKPQEN GSHFGALMSQ QGFADTGNNV 720 QLEADKASLS RSSSGEGSIN SRTSEGSCQG SPANQTFVCQ PIASMFLEPQ EPQLNPEGFT 780 KEPFQEPELP LSRMLIEDSG SSKDLKNLFG SAIGQPMLAP PSNFGPMRNS GTVTIKASFK 840 EDIVRFRFPC SSSVMALKDE VAKRLRMDAG MFDIKYLDDD HEWVKLACNA DLEECIEISR 900 HSGTHVIRLL VTDVAAHIGS SCGSSG

Sequence ? help Back to Top

Protein Sequence Length: 926 aa Download sequence

LWPFDSLTTS LFFSSVSSSP PLHPLPVASS SWLTPPSPLW LFEDRQMMPI EVGPAPAAAP  60
DNTAAVPEET QRARSVNKLY GSRKRNSDTP IKKTERLNNK WQFNLALHDD STNSSCLFKE  120
KLTHALRYFK ESTDQHLLVQ VWAPVKSGDR YVLTTSGQPF VLDHQSIGLL QYRAVSMMYM  180
FSVDGDNAGE LGLPGRVYKQ KVPEWTPNVQ YYSSTEYPRL NHAISYNVHG TVALPVFDPS  240
VQSCIAVVEL IMTSKKINYA DEVDKVCKAL EAVNLKSTEI LEHPNVQICN EGRQSALVEI  300
LEILTVVCEE HKLPLAQTWV PCKYRSVLAH GGGVKKSCLS FDGSCMGEVC MSTSDVAFHV  360
IDAHMWGFRD ACVEHHLQKG QGVSGKAFIY HRPCFSKDIS QFCKLEYPLV HYARMFGLAG  420
CFAICLQSPY TGDDYYMLEF FLPPSCKEED DQNALLESIL GLINQCLRNL KVAGNGESNE  480
ASLQLSNVIM IESEDFKTNV HFENSEGFRE SPEGDTHGGA HEFDKANSKV SEGHLLADDN  540
SQNNGVSVSR PNGSAASDSS LLHKNGKPPE RRRGKAEKTI SLEVLQQYFS GSLKNAAKSL  600
GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKQVIES VQGSDAAFNL TSITGPLPTI  660
PVGPSSDSFN KEKASESKAE HSNRAVDGDR DSSLQKPQEN GSHFGALMSQ QGFADTGNNV  720
QLEADKASLS RSSSGEGSIN SRTSEGSCQG SPANQTFVCQ PIASMFLEPQ EPQLNPEGFT  780
KEPFQEPELP LSRMLIEDSG SSKDLKNLFG SAIGQPMLAP PSNFGPMRNS GTVTIKASFK  840
EDIVRFRFPC SSSVMALKDE VAKRLRMDAG MFDIKYLDDD HEWVKLACNA DLEECIEISR  900
HSGTHVIRLL VTDVAAHIGS SCGSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021790.1