PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG012070.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 225aa MW: 25663.8 Da PI: 7.6965

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG012070.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.9	5.4e-21	89	148	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k TRIDC3AG012070.6 89 RQRWTPTQMQLQILENIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSK 148 89***************99***********************************98 PP
2	Wus_type_Homeobox	100	1.8e-32	88	151	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR++ kq TRIDC3AG012070.6 88 ARQRWTPTQMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKWKQ 151 789**********************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
LDLDPVLPIF KFLARGVSQS WLRHCVKVIT DEQIEVLRKQ ISIYAIICEQ LIEMHRALTT 60 HQDSIAGMSL DNLYCDPLMV HGGHKITARQ RWTPTQMQLQ ILENIFDQGN GTPSKQKIKD 120 ITAELSQHGQ ISETNVYNWF QNRRARSKWK QAASSLPNNA ESEAEGDEES LTDKKPRSDG 180 SQQQNMAVRA HNPERISEMH RHFDAAERGQ VRGPKMYGSS NDSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	151	RRARSKWKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-63	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG012070.6