PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG012070.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WOX | ||||||||
Protein Properties | Length: 172aa MW: 19500.5 Da PI: 8.511 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.6 | 3.2e-21 | 36 | 95 | 2 | 56 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 r+R+t+t+ ql++Le+ F + n +ps++++++++++l +++e++V++WFqNrRa+ k TRIDC3AG012070.2 36 RQRWTPTQMQLQILENIFDQgNGTPSKQKIKDITAELsqhgQISETNVYNWFQNRRARSK 95 89*****************99*************************************98 PP | |||||||
2 | Wus_type_Homeobox | 100.7 | 1e-32 | 35 | 98 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPt+ Q++iLe+++++G tP+k++i++itaeL+++G+i+++NV++WFQNr+aR++ kq TRIDC3AG012070.2 35 ARQRWTPTQMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKWKQ 98 789**********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MHRALTTHQD SIAGMSLDNL YCDPLMVHGG HKITARQRWT PTQMQLQILE NIFDQGNGTP 60 SKQKIKDITA ELSQHGQISE TNVYNWFQNR RARSKWKQAA SSLPNNAESE AEGDEESLTD 120 KKPRSDGSQQ QNMAVRAHNP ERISEMHRHF DAAERGQVRG PKMYGSSNDS SR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 98 | RRARSKWKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 5e-47 | WOX family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG012070.2 |