PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG057100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TCP | ||||||||
Protein Properties | Length: 203aa MW: 21563.4 Da PI: 10.1046 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 109.2 | 6.3e-34 | 51 | 134 | 2 | 80 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.sec....eaessss 80 ag+ + +++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++t+eWLl+qa+p+i ++tg+++++a +c ++++ s TRIDC2BG057100.1 51 AGAAKGAKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTVEWLLRQAEPSILAATGSGTTPAvFSCssapSTAAVSL 134 56667789********************************************************88888544432221111111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MASRDAATFQ LYRPMAMPTA TPMSQTMAMP GFSSAEAADD AVVAVPGPRK AGAAKGAKDR 60 HSKVNGRGRR VRMPIVCAAR VFQLTRELGL KSDGQTVEWL LRQAEPSILA ATGSGTTPAV 120 FSCSSAPSTA AVSLLGKRPR EDHEHEAAPS FWEALQARPV PWGLSPSLEA QAYASSVAQG 180 HHHHLNLLSA LSGASRRPEE ESR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08330.1 | 2e-38 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG057100.1 |