PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG056800.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 410aa    MW: 44617.2 Da    PI: 10.2029
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG056800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44e-19201251256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  TRIDC2BG056800.1 201 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 251
                       59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
SSASGESGSG GGRGTARRWK GKGVTPIQAR RQQQLAPVFE DASAALLRPL RKIGRSPDRL  60
HRTTSSLSTS SSSAPASPRS FPASDAVAPS ARHIFPFAYE PSATTARESP QLLRQYSSMS  120
QPASPPPQQQ PLRHQQMISF GGSPPCATQS FFMPVESAQQ QQHLLRYWSE ALNLSPRGGL  180
AGMPPSLYQQ LLRAPPPPQK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEDAAMA  240
YDREAFKLRG ENARLNFPDR FLGKDRAGGS GRTSAASSAA TSAAAGTASC SSSSSSPPQT  300
SDEAAANTQQ APRQREQQHA EWSTLENQPQ HPPPTTIPQD GGSRDAATPY SAEMFHSSAQ  360
SGGMWAQADE SWFNTWGPGS SFWDYEMDDS ARSLFIHHPR FSGEDAGMSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28140.15e-38ERF family protein