PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG054220.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 387aa    MW: 42389.5 Da    PI: 8.0211
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG054220.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK901.9e-281162152
             RWP-RK  1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                       aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++
  TRIDC2BG054220.16 11 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 62
                       589***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MRLAEKKRST AEKNIGMDVL RKYFSGSLKD AAKSLGVCPT TLKRICRTHG ISRWPSRKIN  60
KVNRSLKKIQ TVINSVHGVD SSLQYDPATG SLVPAVSLPE KTSFPSCDAV SSPSVGKTVD  120
EKSGPKSEQG YSSPEGWERE SCQLQRPDAQ KGEGDEFHMQ TSNYSGSGDH ASYGANVTHH  180
INSEGTQEPL YPIGAVSALH DKETGCIEPS ARVLPSIKTT RDQIVGRNSP PAQQADIDMF  240
DDREGREHTH PSTSGMTDSS SGSASSHPTF KKNPARPLKD KSSPALTVKA TYNGDTVRFK  300
FLPSMGWYNL LEEIAKRFKL SMGVFQLKYK DDEDEWVIMA NNSDLQECVD VMDSMGTRNV  360
KLQVRDLPCL ISSSGSSSCL QLEGHNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.11e-48Nin-like family protein