PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG035110.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 396aa MW: 44779.9 Da PI: 6.073

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG035110.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	168	1.5e-52	34	148	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 e +rw +++ei+a+L+n+e++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdgktv+E+hekLK+g+ e +++yYa++e+np+f TRIDC2BG035110.2 34 EaASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGAIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFF 126 4489*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL++e e+ivlvhy+++ TRIDC2BG035110.2 127 RRCYWLLDKEAERIVLVHYRQT 148 *****************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MAGAAGRERD PLLRSEIHGF ITYADLNFEK LKAEAASRWF RPNEIYAVLA NHERFKVHAQ 60 PIDKPVSGAI VLYDRKVVRN FRKDGHNWKK KKDGKTVQEA HEKLKIGNEE RVHVYYARGE 120 DNPNFFRRCY WLLDKEAERI VLVHYRQTSE ENAIAHPSTE AEAEAPTMNV IQYYTSPPIS 180 ANSASVHTEI SFSPPAPEEI NSHGGSAISS DTGGSSLEEF WVHLLESSMK KDTACGASVA 240 FSQQIKCGMK DSGNDTDSTN NVHANHAGAL EHQLDQSQYP LTSDLDSQSQ QFATSLRRTP 300 VDGDIPNDVP ARENSLGLWK YLDDDSPCLG DNIVSTEKIF NITDFSPEWA CSTEHTKVCP 360 FHVLLNYHSF LFYCICAWSF HFQLFSSMEM FHHVFT

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MAGAAGRERD PLLRSEIHGF ITYADLNFEK LKAEAASRWF RPNEIYAVLA NHERFKVHAQ  60
PIDKPVSGAI VLYDRKVVRN FRKDGHNWKK KKDGKTVQEA HEKLKIGNEE RVHVYYARGE  120
DNPNFFRRCY WLLDKEAERI VLVHYRQTSE ENAIAHPSTE AEAEAPTMNV IQYYTSPPIS  180
ANSASVHTEI SFSPPAPEEI NSHGGSAISS DTGGSSLEEF WVHLLESSMK KDTACGASVA  240
FSQQIKCGMK DSGNDTDSTN NVHANHAGAL EHQLDQSQYP LTSDLDSQSQ QFATSLRRTP  300
VDGDIPNDVP ARENSLGLWK YLDDDSPCLG DNIVSTEKIF NITDFSPEWA CSTEHTKVCP  360
FHVLLNYHSF LFYCICAWSF HFQLFSSMEM FHHVFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	4e-61	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG035110.2