PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG054390.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 225aa MW: 23996.3 Da PI: 10.0653

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG054390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.9	7.8e-34	73	157	2	81
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.sec....eaesssss 81 ag+ + +++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++t+eWLl+qa+p+i ++tg+++++a +c ++++ s TRIDC2AG054390.1 73 AGAAKGAKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTVEWLLRQAEPSILAATGSGTTPAvFSCssapSTAAVSLL 157 56667789********************************************************888885444322211122221 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
ITSPHICAPP ERKLSHQQLA MASRDAATFQ LYRPMAMPTA TPMSQTMAMP GFSSAEAADD 60 AVVAVPVPAP RKAGAAKGAK DRHSKVNGRG RRVRMPIVCA ARVFQLTREL GLKSDGQTVE 120 WLLRQAEPSI LAATGSGTTP AVFSCSSAPS TAAVSLLGKR PREEHEHEAA PSFWEALQAR 180 PVPWGLSPSL EAQAYASSVA QGHHHHLNLL SALSGASRRP EEESR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08330.1	2e-36	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG054390.1