PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG030810.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 888aa MW: 99742.8 Da PI: 9.2463

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG030810.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.3	5.1e-52	16	130	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 e +rw +++ei+a+L+n+e++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdgktv+E+hekLK+g+ e +++yYa++e+np+f TRIDC2AG030810.2 16 EaASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFF 108 4489*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL++e e+ivlvhy+++ TRIDC2AG030810.2 109 RRCYWLLDKEAERIVLVHYRQT 130 *****************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 888 aa Download sequence
SVCVVTYLNF EKLKAEAASR WFRPNEIYAV LANHERFKVH AQPIDKPVSG TIVLYDRKVV 60 RNFRKDGHNW KKKKDGKTVQ EAHEKLKIGN EERVHVYYAR GEDNPNFFRR CYWLLDKEAE 120 RIVLVHYRQT SEENAIAHPS TEAEAEAPTM NVIQYYTSPI SANSASVHTE ISFSPPAPEE 180 INSHGGSAIS SDTGGSSLEE FWVHLLESSM TKDTACGGTS GQSASVAFSQ QIKCGTKDSG 240 NDTDSTNNTQ SSRTPRKREL PAPYPTNCAL NQVHANHAGA LEHQVDQSQY PLTSDLDSQS 300 HQFATSLRKT PVDGDIPNDV PARENSLGLW KYLDDDSPCL GDNIVSNGKI FNITDFSPEW 360 ACSTEHTKIL VIGDYYEQYK HLAGSNIYGI FGDNCVAANM VQTGVYRFMV GPHTAGRVDF 420 YLTLDGKTPI SEVLNFEYRS VPGSSLHSEL KPLEDEYTKS KLQMQMRLAR LLFVTNKKKI 480 APKLLVEGSK VSNLILASPE KEWMDLWKIA GDSEGTSVHA TEDLLELVLR NRLQEWLLER 540 VIGGHKSTGR DDLGQGPIHL CSFLGYTWAI RLFSVSGFSL DFRDSSGWTA LHWAAYHGRE 600 KMVAALLSAG ANPSLVTDPT AVSPGGCTPA DLAARQGYVG LAAYLAEKGL TAHFESMSLS 660 KGTKQSPSRT KLTKVHSEKF ENLTEQELCL KESLAAYRNA ADAASNIQAA LRDRTLKLQT 720 KAILLANPEM QATAIVAAMR IQHAFRNYNR KKEMRAAARI QNHFRTWKVR RNFKNMRRQA 780 IRIQAAYRGH QVRRQYRKVI WSVGVVEKAI LRWRKKRKGL RGIANGMPAE MTVDVEAAST 840 AEEGFFQASR QQAEDRFNRS VVRVQALFRC HRAQHEYRRM RIAHEEMT

Sequence ? help Back to Top

Protein Sequence Length: 888 aa Download sequence

SVCVVTYLNF EKLKAEAASR WFRPNEIYAV LANHERFKVH AQPIDKPVSG TIVLYDRKVV  60
RNFRKDGHNW KKKKDGKTVQ EAHEKLKIGN EERVHVYYAR GEDNPNFFRR CYWLLDKEAE  120
RIVLVHYRQT SEENAIAHPS TEAEAEAPTM NVIQYYTSPI SANSASVHTE ISFSPPAPEE  180
INSHGGSAIS SDTGGSSLEE FWVHLLESSM TKDTACGGTS GQSASVAFSQ QIKCGTKDSG  240
NDTDSTNNTQ SSRTPRKREL PAPYPTNCAL NQVHANHAGA LEHQVDQSQY PLTSDLDSQS  300
HQFATSLRKT PVDGDIPNDV PARENSLGLW KYLDDDSPCL GDNIVSNGKI FNITDFSPEW  360
ACSTEHTKIL VIGDYYEQYK HLAGSNIYGI FGDNCVAANM VQTGVYRFMV GPHTAGRVDF  420
YLTLDGKTPI SEVLNFEYRS VPGSSLHSEL KPLEDEYTKS KLQMQMRLAR LLFVTNKKKI  480
APKLLVEGSK VSNLILASPE KEWMDLWKIA GDSEGTSVHA TEDLLELVLR NRLQEWLLER  540
VIGGHKSTGR DDLGQGPIHL CSFLGYTWAI RLFSVSGFSL DFRDSSGWTA LHWAAYHGRE  600
KMVAALLSAG ANPSLVTDPT AVSPGGCTPA DLAARQGYVG LAAYLAEKGL TAHFESMSLS  660
KGTKQSPSRT KLTKVHSEKF ENLTEQELCL KESLAAYRNA ADAASNIQAA LRDRTLKLQT  720
KAILLANPEM QATAIVAAMR IQHAFRNYNR KKEMRAAARI QNHFRTWKVR RNFKNMRRQA  780
IRIQAAYRGH QVRRQYRKVI WSVGVVEKAI LRWRKKRKGL RGIANGMPAE MTVDVEAAST  840
AEEGFFQASR QQAEDRFNRS VVRVQALFRC HRAQHEYRRM RIAHEEMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG030810.2