PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG035770.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 122aa    MW: 13524.9 Da    PI: 11.2421
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG035770.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.32.7e-30959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien + rqvtfskRrng+lKKA+ELSvLCdaeva+++fs++g+lye++s
  TRIDC1BG035770.4  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGRLYEFAS 59
                      79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALVVFSP RGRLYEFASA  60
TRYPPPRKRQ ILNLVSLLLF EIRLLLVGSW VHGRGDDTVR PSSGLAGVCN AAVAIIGGRE  120
LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.13e-38MIKC_MADS family protein