PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG032140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 262aa MW: 28869.9 Da PI: 8.4601 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 170.5 | 5.3e-53 | 6 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtd+elv +yLk++v++ k+el evi+ +d+yk+ePw+Lp k + +++ ew+fF++rd+ky++g+r+nrat++gyWkatgkd++ TRIDC1BG032140.1 6 LPPGFRFHPTDDELVGYYLKRRVDNLKIEL-EVIPVIDLYKCEPWELPeKsFLPKRDLEWFFFVPRDRKYPNGSRTNRATTTGYWKATGKDRK 97 79****************************.99**************95334445667*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v + +g++ g++ktLvfykgrap ge+tdWvmheyrl TRIDC1BG032140.1 98 VSCDGGAVCGVRKTLVFYKGRAPGGERTDWVMHEYRL 134 ***********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGTMTLPPGF RFHPTDDELV GYYLKRRVDN LKIELEVIPV IDLYKCEPWE LPEKSFLPKR 60 DLEWFFFVPR DRKYPNGSRT NRATTTGYWK ATGKDRKVSC DGGAVCGVRK TLVFYKGRAP 120 GGERTDWVMH EYRLCQDLLH GASNFIGAYA LCRVIKRTEA GLLHGDAVAK AKPGHQQMTK 180 VGSSSSLVTT DQQLSSLTPS PPRLDIVGNA FQLHSSPSPL YGGEVMSGMG APLGFPQQDA 240 AGTFFIDGDL AGAGETTQAH MP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 1e-83 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG032140.1 |