PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG033740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 232aa MW: 24166.9 Da PI: 8.2577 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 65.8 | 8.1e-21 | 19 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell dav+++G ++W+ I+++++ gRt+k+c++rw + TRIDC1AG033740.1 19 KGSWSPEEDELLRDAVARHGARNWTVISAEIP-GRTGKSCRLRWCNQ 64 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.1 | 4.1e-18 | 71 | 115 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T++Ed l+ d++ ++G++ W+tIar++ gRt++++k++w++ TRIDC1AG033740.1 71 RRAFTPDEDRLIFDLHSKHGNK-WATIARKLV-GRTDNSVKNHWNST 115 678*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MPDGGGGSDG AGAGAGRIKG SWSPEEDELL RDAVARHGAR NWTVISAEIP GRTGKSCRLR 60 WCNQLSPGVH RRAFTPDEDR LIFDLHSKHG NKWATIARKL VGRTDNSVKN HWNSTLRKRR 120 RAAAAAATAG NAAGGPAFAP ASAMSFQSVD LTKGGEDDYD DDDGDSDGSV EPPASAKRPR 180 VDVVPPAVKV DDRAPPPDPP TSLSLSLPGT GVGAVIPPTP PAPVPAPAPA KE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 121 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 4e-47 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG033740.1 |