PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG033510.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 370aa    MW: 40390 Da    PI: 4.7421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG033510.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.6e-20114164155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +g++GVr++  +g+WvAeIr+p   + r  r +lg+f tae+Aa+a+++a+++++g
  TRIDC1AG033510.5 114 CGFRGVRQRT-WGKWVAEIREP---N-RvSRLWLGTFPTAEDAARAYDEAARAMYG 164
                       79*****999.**********8...2.58************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MTEMGTSHLT EKSAEITVCV SAGSSNLPCN EYAFLARQNP KGDALPVASI LRKKRPRRSR  60
DGPNSVSETI RRWKEVNQQL EHDPQGAKRA RKPPAKGSKK GCMQGKGGPE NTRCGFRGVR  120
QRTWGKWVAE IREPNRVSRL WLGTFPTAED AARAYDEAAR AMYGALARTN FPAHPAQAPA  180
VALPAAIEGV VRGASASCES TTTSANHSDV ASNLPRQAQA LEIYSQPDVL ESTESVVLES  240
VEHYSHKDTV PDAGSSIARS TSEEDVFEPL EPISSLPDGE ADGFDIEELL RLMEADPIEV  300
EPVTGGSWNC GTNTGVEMGL QEPLYLDGLD SMLEGMLQAD YPYPMWISED RAMHNPAFHD  360
AEMSEFFEGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-36ERF family protein