PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG030270.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 25982.9 Da PI: 9.2457 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.4 | 3.9e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRrng+lKKA+ELSvLCd+eva+ +f ++g+lye+ss TRIDC1AG030270.4 9 KRIENETSRQVTFSKRRNGLLKKAFELSVLCDVEVALAVFCPRGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 59.3 | 1.6e-20 | 78 | 171 | 4 | 97 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + ++++ + + ++ + + L k++e L+ ++ ++lGe+L+ +s +eL+ Le ++eksl+ iR kK+++l +qi +l++ke+ l ++n++Lr TRIDC1AG030270.4 78 NVNNKTVQPDIQQVKADTVSLAKKLEALEVSKLKILGENLGGCSAEELNCLEVNIEKSLRIIRGKKTQVLEQQIANLKEKERTLLKDNEDLRG 170 4555577888999******************************************************************************98 PP K-box 97 k 97 k TRIDC1AG030270.4 171 K 171 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MVRGKTEMKR IENETSRQVT FSKRRNGLLK KAFELSVLCD VEVALAVFCP RGRLYEFSSA 60 TSLQKSIDRY KAYRKDNNVN NKTVQPDIQQ VKADTVSLAK KLEALEVSKL KILGENLGGC 120 SAEELNCLEV NIEKSLRIIR GKKTQVLEQQ IANLKEKERT LLKDNEDLRG KQRDLEASLV 180 VPALNCVTPL QPRGQLAPEQ EPVPSDEDVE TELYIGLPGV RCSNRRSGQA K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-64 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG030270.4 |