PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY93092.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 301aa MW: 34217 Da PI: 5.61 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.7 | 7.3e-22 | 18 | 77 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ TEY93092.1 18 SRWNPTPEQLHTLEELYRRgTRTPSAEQIQHITTELrrygKIEGKNVFYWFQNHKARERQ 77 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.3 | 3e-37 | 17 | 79 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+it+eL++yGkie+kNVfyWFQN+kaRerqk+ TEY93092.1 17 SSRWNPTPEQLHTLEELYRRGTRTPSAEQIQHITTELRRYGKIEGKNVFYWFQNHKARERQKR 79 79***********************************************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 301 aa Download sequence |
MAEQGKRDLT TQQVVVSSRW NPTPEQLHTL EELYRRGTRT PSAEQIQHIT TELRRYGKIE 60 GKNVFYWFQN HKARERQKRR RQLESFPDEQ VQSNQENGEK REAAAWNSAM RSCDPLLDSA 120 MGLCLYSRIC LLILFFCLSS PANTTLFEVE HTKDWPSPTH STTAASAAAQ KSGEGEAEAE 180 AECKADDGWV QFEEEAELQR RRNATLQMMN LSCSSSSSSS SAPTPTIPSA LATMQFNPQD 240 FFNIFFQPYH HSSSAADAQT LQLFPLQSDT DCHRHEDIRD AVSLNNIAAP FQFFEFLPLK 300 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18010.1 | 4e-39 | WOX family protein |