PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY89102.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | AP2 | ||||||||
Protein Properties | Length: 393aa MW: 43944.4 Da PI: 9.2058 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.4 | 1.3e-16 | 175 | 226 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g TEY89102.1 175 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 226 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence |
MAMTMRMIKS EARLHAAMHG DTTRVKRRRR DPSVSEDKGA VAEPKQAAAA TTVKRSSKYR 60 GVSRHRWTGR YEAHLWDKLS WNTSQKKKGK QGVVVFTKIL IGTDSYEYLS GAYDDEEAAA 120 RAYDLAALKY WGTSTFTNFP ISDHEVEIGV MQSTTKEEYL ASLRRKSSGF SRGVSKYRGV 180 ARHHHNGRWE ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGINAV TNFDLSNYIR 240 WLKPGASAPV AAAQDTKMGI DLPPLAPAYL AREESQPLSP CLKRKAYSAE DLQESFSCKN 300 LMSPCSKPSP TALSLLFRSS LFRELLEKNS YASEEEIQDG NTQIETRVGS GDGYGGMFSN 360 ESGDLPFVLS ANRHTIDLQG QLDLEYSCPD SIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-68 | AP2 family protein |