PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY77939.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 333aa MW: 37917.8 Da PI: 5.967 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.2 | 1.9e-27 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 k+ien++nrqvtfskRrng++KKA+ELSvLCd++va+i+fs++g++ +s TEY77939.1 9 KKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRVSIFS 58 68*******************************************98776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MGRVKLQIKK IENTTNRQVT FSKRRNGLIK KAYELSVLCD VDVALIMFSP SGRVSIFSGN 60 TSIEEIMARF VNLPEHERGR LHNQEYLERA IGKLKAEADR NYNQAAATGP ASNASMMHSQ 120 IEEMQQELLK CRYQLEDAEK KLRVYESELC EISTLGGEAE YREQVLEENL KQIRLRKHVL 180 QDQHNSPGAQ SSQVMSYPSQ TTDMNVLAAR NPDNVLDWLP QRDPQTQILN FLDSNGLLPM 240 RDQPPQRMDN ILPQSLTLVH APSVHVYNHL SPSHSIEDDV QRSEFGPAID VNLSPWADLY 300 PTGNDPFPTA QPRERALLEL YLSQLTPVNH DHI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22130.1 | 9e-52 | MIKC_MADS family protein |