PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72419.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 504aa MW: 55999.3 Da PI: 7.7837

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.5	5.8e-12	159	215	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +++Aa+a++ a++k++g TEY72419.1 159 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEDKAARAYDLAALKYWG 215 78*****************77776664346655.7799************98 PP
2	AP2	46.9	6.7e-15	258	309	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY72419.1 258 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 309 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MKDMNDDGDI NNWLGFSLSP HMKIEPNSHS PPAANFYLID DAPLSVMPLK SDGSLCLMEA 60 LSRSHPHPKL GAADFYPHQN HYFSNYTFYQ PHQIPQQEWE DNAIRSNEIQ SLSLSMSPGS 120 QSSCITESTA MGSKKRGPDK LQKQTVHRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN 180 SCKKEGQTRK GRQGGYDMED KAARAYDLAA LKYWGPSTHI NFGLENYHQE LEDMKNMSRQ 240 EYVAHLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY 300 DIAAIKFRGV NAVTNFDISR YDVEKIMASN TLPTGEVARR TKDGRPSAEV ASVEECHGGE 360 APLAVAARVE HVSNACEWKM VPYNDAPGQG QGQGNQGSVD VGTLEVKTLN LGSYQSPTFS 420 TSLHDLIGLD TSQRAVHEST TTTMAPHFSN ASSLVISLSS SREASPDRFV RPSSNMGAWI 480 PTAQLKPVLL TTAQLPAFAS WNDA

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MKDMNDDGDI NNWLGFSLSP HMKIEPNSHS PPAANFYLID DAPLSVMPLK SDGSLCLMEA  60
LSRSHPHPKL GAADFYPHQN HYFSNYTFYQ PHQIPQQEWE DNAIRSNEIQ SLSLSMSPGS  120
QSSCITESTA MGSKKRGPDK LQKQTVHRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN  180
SCKKEGQTRK GRQGGYDMED KAARAYDLAA LKYWGPSTHI NFGLENYHQE LEDMKNMSRQ  240
EYVAHLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STQEEAAEAY  300
DIAAIKFRGV NAVTNFDISR YDVEKIMASN TLPTGEVARR TKDGRPSAEV ASVEECHGGE  360
APLAVAARVE HVSNACEWKM VPYNDAPGQG QGQGNQGSVD VGTLEVKTLN LGSYQSPTFS  420
TSLHDLIGLD TSQRAVHEST TTTMAPHFSN ASSLVISLSS SREASPDRFV RPSSNMGAWI  480
PTAQLKPVLL TTAQLPAFAS WNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-124	AP2 family protein