PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY55190.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 489aa MW: 54667.8 Da PI: 6.8876

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY55190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	6.1e-13	314	358	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f+ Lr+ lP+ +K +Ka++L +veY++sL TEY55190.1 314 HMISERKRREKLNESFQILRSFLPPG-----TKKDKASVLSSTVEYMSSL 358 8899******************97.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MDSIFLLEEG DRAALLEQMM QALGCVYICL RAYFSPPYNC LKGLDGIYHE GRNQQTTSHG 60 SFVRRLFDVY REASTYVDAG LIPGIAFASN NPFMKLELHE FQSLISSDFQ LQFYQTIVLM 120 GCATGEIELG MSDNHNQVDI EAAMKNILQT HFPNQPPSSS SSSLLSVSVD SPEYPPLLFN 180 IPTTTAAPPL PFLPQETLIR EPPTTTADAH DQTRQMLSQF RHAHFPSIEC EDAAMTSAIL 240 AVLSSPSTST SSHRPPRTPN ISTAFRAYQP NLPARRRSAA PAPSRFKRAM MFFNNLNHRT 300 RHDQSLPTAT QLHHMISERK RREKLNESFQ ILRSFLPPGT KKDKASVLSS TVEYMSSLKS 360 RVAELVERNR ILEPRIDSVK KSESGGDEVW SGERVSVEIS RSSSTSEARF LDLRVRVRGE 420 SSLLDLVSRV IEFLRGQSGV SLTSVESNTR LLDSVSVHAV IITLRIQGDE FDESGFREGV 480 KRAVDDQPN

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MDSIFLLEEG DRAALLEQMM QALGCVYICL RAYFSPPYNC LKGLDGIYHE GRNQQTTSHG  60
SFVRRLFDVY REASTYVDAG LIPGIAFASN NPFMKLELHE FQSLISSDFQ LQFYQTIVLM  120
GCATGEIELG MSDNHNQVDI EAAMKNILQT HFPNQPPSSS SSSLLSVSVD SPEYPPLLFN  180
IPTTTAAPPL PFLPQETLIR EPPTTTADAH DQTRQMLSQF RHAHFPSIEC EDAAMTSAIL  240
AVLSSPSTST SSHRPPRTPN ISTAFRAYQP NLPARRRSAA PAPSRFKRAM MFFNNLNHRT  300
RHDQSLPTAT QLHHMISERK RREKLNESFQ ILRSFLPPGT KKDKASVLSS TVEYMSSLKS  360
RVAELVERNR ILEPRIDSVK KSESGGDEVW SGERVSVEIS RSSSTSEARF LDLRVRVRGE  420
SSLLDLVSRV IEFLRGQSGV SLTSVESNTR LLDSVSVHAV IITLRIQGDE FDESGFREGV  480
KRAVDDQPN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	318	323	ERKRRE
2	319	324	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-46	bHLH family protein