PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY45315.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 332aa    MW: 37969.9 Da    PI: 6.01
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY45315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.21.9e-27958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                k+ien++nrqvtfskRrng++KKA+ELSvLCd++va+i+fs++g++  +s
  TEY45315.1  9 KKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRVSIFS 58
                68*******************************************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGRVKLQIKK IENTTNRQVT FSKRRNGLIK KAYELSVLCD VDVALIMFSP SGRVSIFSGN  60
TSIEEIMARF VNLPEHERGR LHNQEYLERA LGKLKAEADR NYNQAAATGP ASNTSMMHSQ  120
IEEMQQELLK YRCQLEDAEK KLRVYESELC EISTLGEAEY REQVLEENLK QIRLRKHVLQ  180
DQHNSPGAQS SQVMSYPSQT TDMNVLAARN PDNVLDWLPQ RDPQVQILNF LDSNGLLPMR  240
DQPPQRMDNI LPQSLTLVHT PSMHVYNHLS PSRSIEDDVQ RSEFGPAIDV NLSPWADLYP  300
TGNDPFPTAQ PRERALLELY LSQLTPVNHD HI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-53MIKC_MADS family protein