PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY36530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 195aa MW: 22171.2 Da PI: 5.914 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 65.7 | 4.6e-21 | 26 | 74 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k+ie+ snr vtfskRr g++KKA+EL+ LC++e+a+i+ s +++ + TEY36530.1 26 KKIESLSNRRVTFSKRRLGLFKKASELCLLCETEIAIIVQSLGKHVHSF 74 68***************************************99999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
METEMVMSSE GEKKKKTQGK KKIEIKKIES LSNRRVTFSK RRLGLFKKAS ELCLLCETEI 60 AIIVQSLGKH VHSFGHNSTD AVIDRYLGGG DDHERDAVAP AVNTKELYQH CYSHVLKELE 120 LEKKRRDVAE EGGDVFWWNQ GVEEMELDEM EQFAMALDEL SKKADLRAND LMSSYLQQPL 180 AVASAQNQMG NNLDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24840.1 | 3e-28 | M-type_MADS family protein |