PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY22398.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 371aa MW: 39482.7 Da PI: 9.5715

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY22398.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.8	9.1e-39	34	152	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............. 88 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a+ s++ s++ TEY22398.1 34 PKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGAAISNQPTSISsslhqkieelgvn 132 6999****************************************************************8884444444444333332333334455555 PP TCP 89 ...................k 89 + TEY22398.1 133 lggsrspwpviganlgrpsA 152 55555555555555555550 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MVNNNSNNGE NREVNNLQVV VVEKDDSKKH ALGPKRSSNK DRHTKVEGRG RRIRMPALCA 60 ARIFQLTREL GHKSDGETIQ WLLQQAEPSI IAATGTGTIP ASALAAAGAA ISNQPTSISS 120 SLHQKIEELG VNLGGSRSPW PVIGANLGRP SAGLWPPPGF GFHTSSSSSS SSSSGPSMAA 180 AENPSYLQKM GFAGFELPGG NMGPMSFTSI LSGGNGQQLP GLELGLSQDG NIGVLNSQAF 240 GQFYQQMAPA ARVAHHHLNH HQQQQQPLSP KDDDSQESGH TRVLPCFCKS ALAFQFKKTH 300 AEAVSCLPTH LALQVGLIHT IVSTELILEK GKLVFFALIF SFNGAISISL NGTRVKAFLL 360 TSSKSDVLMI H

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MVNNNSNNGE NREVNNLQVV VVEKDDSKKH ALGPKRSSNK DRHTKVEGRG RRIRMPALCA  60
ARIFQLTREL GHKSDGETIQ WLLQQAEPSI IAATGTGTIP ASALAAAGAA ISNQPTSISS  120
SLHQKIEELG VNLGGSRSPW PVIGANLGRP SAGLWPPPGF GFHTSSSSSS SSSSGPSMAA  180
AENPSYLQKM GFAGFELPGG NMGPMSFTSI LSGGNGQQLP GLELGLSQDG NIGVLNSQAF  240
GQFYQQMAPA ARVAHHHLNH HQQQQQPLSP KDDDSQESGH TRVLPCFCKS ALAFQFKKTH  300
AEAVSCLPTH LALQVGLIHT IVSTELILEK GKLVFFALIF SFNGAISISL NGTRVKAFLL  360
TSSKSDVLMI H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-61	TCP family protein