PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY15127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 231aa MW: 24747.3 Da PI: 7.1224 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.7 | 2.6e-40 | 23 | 123 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll+++p ++r da+ +++yeA+ r+rdP+yG+v++i++lqqq+ +l++el++l+ TEY15127.1 23 PCGACKFLRRKCVAGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLHHIPSQKRLDAVVTICYEAQSRLRDPIYGCVAHIFALQQQVVNLQQELSYLQ 121 7***********************9989********************************************************************999 PP DUF260 99 ee 100 ++ TEY15127.1 122 AH 123 86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MIAAESDIMS SENAAGSSGG GGPCGACKFL RRKCVAGCIF APYFDSEQGA AHFAAVHKVF 60 GASNVSKLLH HIPSQKRLDA VVTICYEAQS RLRDPIYGCV AHIFALQQQV VNLQQELSYL 120 QAHLAALELP TPPPLQPQQL MVPASQSILD LPPIPAAYDF SAMCGDMVAP PSLWSVYPRQ 180 QIDQQRQFSN AAVGGGGGDL QELARELLNR HAPPMVVRCG NQASSLPPNS R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00220.1 | 2e-57 | LBD family protein |