PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY12403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 132aa MW: 14754.1 Da PI: 10.5952 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 63 | 3.4e-20 | 19 | 66 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 +ie ks qv f+kRr g++ KA ELS+LC+aeva+++ s+ +kly + TEY12403.1 19 KIEKKSSLQVAFTKRRGGLFRKATELSILCGAEVAILVQSPAQKLYAF 66 699*******************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MENSNGKKTL GRRKIPMRKI EKKSSLQVAF TKRRGGLFRK ATELSILCGA EVAILVQSPA 60 QKLYAFGHPS VAALIDRIDP IEAAMKMLEA EKRRSTEKEI KGGDQAAFSS NQVKINDHII 120 PTYTLDQIWG RD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24840.1 | 9e-27 | M-type_MADS family protein |