PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro03_G05245 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | Dof | ||||||||
Protein Properties | Length: 171aa MW: 19447.2 Da PI: 9.1604 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.9 | 2.1e-38 | 52 | 110 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +ek+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k Ro03_G05245 52 PEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKP 110 68999***************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MAEVSNGQDV PGIKLFGTTI TLQNRQVLRD DHHRQPKKAD DVHDQTLEMK RPEKIIPCPR 60 CKSMETKFCY FNNYNVNQPR HFCKGCQRYW TAGGALRNVP VGAGRRKTKP PCRELAGFTD 120 GCLYEASEVL HQFELDGMVE EWHVAAVQGN FRHVFPVVKR RRSGSGGQTC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29160.1 | 4e-59 | Dof family protein |