PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro01_G17049 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | NF-YB | ||||||||
Protein Properties | Length: 232aa MW: 26464.2 Da PI: 6.7928 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 179.4 | 3.3e-56 | 55 | 150 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrkting+d++wa++tlGfedyv+plk+yl+kyrelegek Ro01_G17049 55 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGEDIIWAITTLGFEDYVHPLKLYLQKYRELEGEK 150 89*******************************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MEDDNHGNNR LNGPNGGSPE NPCLNNSTPA SSCNSNINIQ HNHNNNHHHH HSSNKEQDRF 60 LPIANVGRIM KKVIPGNGKI SKDAKETVQE CVSEFISFVT GEASDKCQRE KRKTINGEDI 120 IWAITTLGFE DYVHPLKLYL QKYRELEGEK LNVPKQQRLE QRLQQQQQQV LQQEQEQQSI 180 PNSYSVYSST LMSQPTSFIT THHDQAFSLP FSPTSIQKQL QPQDQIDSVG HW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G13570.1 | 2e-68 | NF-YB family protein |