PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0010418.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 345aa MW: 37943.2 Da PI: 7.7186

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0010418.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	57.2	3.7e-18	202	264	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +k+lkre+rkq NRe+ArrsR RK+ae eeL + +++L++e ++Lk+el++lk ++k++ e+ Rmu_sc0010418.1_g000007.1 202 DKQLKREKRKQANRESARRSRMRKQAEYEELVKSCDSLSTEQMDLKSELDRLKVDAEKMRLEN 264 689*******************************************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MAEKKGATLI TNHVISVSTF TAVIPCRHLT TESNTFPASF TTSFSSTRKP PPLSPEISKP 60 SFFEGNMDQD VTKKFKGLDG HAVPIAYVSS KGNSGHPVLE ASKSFEENKD GLTGGADGNT 120 RADHHRRGKN GSYSVPTSDN DVKDHPQVHP NNEGEINRNF ATSNDLVRVP IRSPYEKIAT 180 STPFFSPSAG ERLPFDAMVL DDKQLKREKR KQANRESARR SRMRKQAEYE ELVKSCDSLS 240 TEQMDLKSEL DRLKVDAEKM RLENAALREQ LKNAQVMQEG GNASPKTEGV FTLPNDAKNI 300 LSNLGSVSSN APPDCETHET SVSETVTRLH QLLESSSRTD AVAAR

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MAEKKGATLI TNHVISVSTF TAVIPCRHLT TESNTFPASF TTSFSSTRKP PPLSPEISKP  60
SFFEGNMDQD VTKKFKGLDG HAVPIAYVSS KGNSGHPVLE ASKSFEENKD GLTGGADGNT  120
RADHHRRGKN GSYSVPTSDN DVKDHPQVHP NNEGEINRNF ATSNDLVRVP IRSPYEKIAT  180
STPFFSPSAG ERLPFDAMVL DDKQLKREKR KQANRESARR SRMRKQAEYE ELVKSCDSLS  240
TEQMDLKSEL DRLKVDAEKM RLENAALREQ LKNAQVMQEG GNASPKTEGV FTLPNDAKNI  300
LSNLGSVSSN APPDCETHET SVSETVTRLH QLLESSSRTD AVAAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	226	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	6e-26	bZIP family protein