PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004015.1_g000021.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 136aa MW: 14591.2 Da PI: 9.5317 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 24.4 | 4.9e-08 | 6 | 25 | 38 | 57 |
TS-HHHHHHHHHHHHHHHHC CS Homeobox 38 gLterqVkvWFqNrRakekk 57 +++ ++V++WFqN++a++k+ Rmu_sc0004015.1_g000021.1 6 KIEGKNVFYWFQNHKARDKQ 25 6899**************97 PP | |||||||
2 | Wus_type_Homeobox | 49.4 | 1.1e-16 | 1 | 27 | 39 | 65 |
Wus_type_Homeobox 39 LeeyGkiedkNVfyWFQNrkaRerqkq 65 L++yGkie+kNVfyWFQN+kaR++qk+ Rmu_sc0004015.1_g000021.1 1 LKRYGKIEGKNVFYWFQNHKARDKQKK 27 799**********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
LKRYGKIEGK NVFYWFQNHK ARDKQKKKIT SDVHVPMQRS GLVGNGTNWK PEDKYINFGS 60 SASASASSAG VGGSIKEIET LPLFPMHGED IFGNMKTTSE GGSGYVYYSG GSGGYNDGSR 120 ISLELSLNSS GAADLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 2e-12 | WOX family protein |