PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000986.1_g000011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 312aa MW: 35506 Da PI: 10.3069 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.7 | 2.2e-18 | 26 | 105 | 15 | 99 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++p kf+++h + + + +l+ +sg++ +v+l +k+ ++ ++ GW +Fvk+++L+ gDf+vF++dg+s+f +vk++ Rmu_sc0000986.1_g000011.1 26 GVRIPPKFTKNHIRP--SLCKCVLRGPSGQRCDVEL--EKRENGlFFHNHGWHRFVKDHRLQFGDFLVFRYDGESKF--KVKIY 103 579******888555..3448***************..99999978888************************9999..99999 PP -S CS B3 98 rk 99 ++ Rmu_sc0000986.1_g000011.1 104 DR 105 87 PP | |||||||
2 | B3 | 45.8 | 1.1e-14 | 201 | 289 | 12 | 99 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 ++ r+++pk+ a + g+ ++kt+ +ed++gr W kl ++k ++ +++GW + kan++ +gD+vvF+++++s Rmu_sc0000986.1_g000011.1 201 SRYRMMIPKDLAVTKGLM--SKKTIEIEDSTGRLWPAKLVSltskeNNKTCGLAMSTGWGDCSKANKIAVGDTVVFEFVKQSVI 282 5678********999887..5679***************7778888888899*************************9875555 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 ++++frk Rmu_sc0000986.1_g000011.1 283 --RLHIFRK 289 ..7777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MITLVFAPTR LIYTPTRTRV IASGMGVRIP PKFTKNHIRP SLCKCVLRGP SGQRCDVELE 60 KRENGLFFHN HGWHRFVKDH RLQFGDFLVF RYDGESKFKV KIYDRTCCEI DVEVAKRRNG 120 LPAAPLANEG YQLAWVKDEI VDLKTEYYNR DDTENADKRR RNNHMSGKPP RVEDGKETST 180 GSIIFKSEYS CFKATLKTRC SRYRMMIPKD LAVTKGLMSK KTIEIEDSTG RLWPAKLVSL 240 TSKENNKTCG LAMSTGWGDC SKANKIAVGD TVVFEFVKQS VIRLHIFRKG LGTRGGNNRP 300 NPVVLDAPNI KN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 3e-15 | B3 family protein |