PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000367.1_g000031.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 231aa MW: 25724.5 Da PI: 8.7804

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000367.1_g000031.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102.2	9e-32	85	165	3	83
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssas 83 +kd++ + Tkv+gR+RR+Rl+ caar+F+L+ eLG+++d++tieWLl+qa+p+i + tg++ ++++ ++ +s++ + Rmu_sc0000367.1_g000031.1 85 LGKDSSEDNNTKVDGRGRRIRLPPICAARIFQLTHELGHKTDGQTIEWLLKQAEPSILAVTGNGVTPSNTLSTLASVNLQV 165 579************************************************************999997773333333332 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MSVNDMACHL KLRPQIIFLL YRGWKVTWAI KGGSLQEQVA LKPQLFITNP KQFLEHSYVL 60 IIYLLTMGTN PSISTNASSS ISKVLGKDSS EDNNTKVDGR GRRIRLPPIC AARIFQLTHE 120 LGHKTDGQTI EWLLKQAEPS ILAVTGNGVT PSNTLSTLAS VNLQVEKVVS EDKNFVRKKC 180 TTGGQPLPPP YDHYLKIITK NYGIEFSVND VAIDVGIETQ EEFKEKDGKQ D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08330.1	2e-31	TCP family protein