PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000047.1_g000016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | G2-like | ||||||||
Protein Properties | Length: 500aa MW: 54636.1 Da PI: 5.3932 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 74.6 | 1.4e-23 | 100 | 153 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++l Wt+eL +rF+e v+ + G e+A+Pktile+m+v+gLt+e+v+SHLQkYR Rmu_sc0000047.1_g000016.1 100 KAKLIWTQELQARFLESVHFI-GLERAVPKTILEVMNVEGLTRENVASHLQKYRQ 153 6799*****************.********************************5 PP | |||||||
2 | Myb_DNA-binding | 29.5 | 1.7e-09 | 103 | 152 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + WT+e++ ++++ v+ G + +ktI + m+ +g+t++++ s++qky+ Rmu_sc0000047.1_g000016.1 103 LIWTQELQARFLESVHFIGLEraVPKTILEVMNvEGLTRENVASHLQKYR 152 56***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence |
MFEHAVVSAD DREHVILKAL KLGAAHYIVK PVCFDDVKNL WKFVVNADRS HKEISFVEEI 60 ESGGEQSSET STSDEDSNGD HEKNNSKRRK STKEGKAPKK AKLIWTQELQ ARFLESVHFI 120 GLERAVPKTI LEVMNVEGLT RENVASHLQK YRQFLRRVAV KISVSKSDIG NKSQTSSSTF 180 GQSQTSIFQQ QPISGQNLSI NLIASSLGRP LFHANHHEAS TTSVPPFGNT SHLYQPNSLS 240 HFQMPQPAFM GYPGSFQPAN YSSVNGSGFQ TNNVQSNWSS ANGLQAQTSP LTNHLYGNYN 300 NDGMSTGFQF GSWNGTMGFL NDSNNLITNN YYGGLPMSGA ASVGLVGFNS NQNPNLMVAK 360 YGWASTTSGL DTNFFGSVLN DIDQSELHQE MNNTSPTGNL MFGNNKFSGV EDASSVGFGG 420 ITTVEAAASS SNVVDVSPNQ NQTGEYFDEL DDILFNDTNL QSVNQEEGKE VVNFYEINAN 480 AVQENASLLK ESNGQACICH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-27 | ARR-B family protein |