PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8377151.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 96aa MW: 11137 Da PI: 7.5005 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.3 | 4.1e-09 | 5 | 40 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WTteE + ++++ +++G++ W ++a+ + +R+l+++ Rmu_co8377151.1_g000001.1 5 QWTTEELKHFYEGYRKYGKD-WMKVASVVR-HRSLENV 40 6*****************99.*********.***9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MLGPQWTTEE LKHFYEGYRK YGKDWMKVAS VVRHRSLENV EALYTMNRAY LSLPEGAASV 60 IGLTAMMCDY YSMLVSLDFI FAFLVDRLCI ASEHKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 7e-36 | MYB_related family protein |