PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW33798.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 335aa MW: 35854.8 Da PI: 6.0741 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.3e-18 | 114 | 163 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrd + r r++lg+f taeeAak ++ a+ +l+g RWW33798.1 114 RFRGVRRRP-WGKYAAEIRDpF-----RrVRVWLGTFNTAEEAAKVYDSAAIQLRG 163 69*******.**********66.....45*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 335 aa Download sequence |
MNLMDATFLV PVKRTEHVAV TPKPLSARPR TVRVFCDDYD ATDSSGDEGE CCHSRRRVRR 60 YVQEIRFEAR PDGGGAQAAA EAGKSKAAKG GGSAVKKRKG RPFPAASGDG SVQRFRGVRR 120 RPWGKYAAEI RDPFRRVRVW LGTFNTAEEA AKVYDSAAIQ LRGPDATTNF ARPTATAAAT 180 NHIPPPPPKR NLSDNNLTSV SGGYESAEES HNLSSPTSVL RGLSSSFAKP TDQAEKSKPP 240 ATVGDEKGGA TSPSVQFGGF LPLDDEDSLF HGVLGFFDDD PSPIGSLAED LSDAFLLGSG 300 LDDVDLRAST STWQGADDFF EGIGDLFPIE PLPAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G27950.1 | 6e-36 | ERF family protein |