PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW32010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 27122.2 Da PI: 8.4374 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.8 | 8.4e-21 | 73 | 122 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ kl+g RWW32010.1 73 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAAMAYDRAAFKLRG 122 59******9.**********955...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MAAMRFLSRI HDEYAVGRQA RIGLNYLPPV QFQHPLSAAA EQQQMAYAGF LGPRPQSMKR 60 SGSSASPPKP TKLYRGVRQR HWGKWVAEIR LPRNRTRLWL GTFDTAEEAA MAYDRAAFKL 120 RGDGARLNFP ELRRNGAHFG APLHSSVDAK LQAICESMAS SQKQGKARPN VAAANEIISS 180 GSEDNKSESS SSLEGDETSS GTTAASEIQY LDFTEAPWDE SESFKLHKYP SWEIDWDSIL 240 SSDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78080.1 | 2e-58 | ERF family protein |