PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW31432.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 157aa MW: 17898.4 Da PI: 10.4838 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.5 | 1.6e-18 | 24 | 72 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ +g+W+AeIrdp+ + r++lg+f taeeAa+a+++ +++++g RWW31432.1 24 YRGIRHRP-WGKWAAEIRDPV----KgVRVWLGTFATAEEAARAYDREARRIRG 72 9****888.**********75....44************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MKPLFVVLYL VDTAQRKRER KNLYRGIRHR PWGKWAAEIR DPVKGVRVWL GTFATAEEAA 60 RAYDREARRI RGKKAKVNFP NEDPLPNPPR RRPSATVSSY EARWLFDQPT TAAAHASSTM 120 NLYEVPPYVE SVVSSTGPPG MEMLWSFDDV SPSSSHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 1e-25 | ERF family protein |