PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW28179.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 177aa MW: 19659.4 Da PI: 8.3496 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 5 | 49 | 1 | 49 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaa 49 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a RWW28179.1 5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEA 49 59*******9.**********8.....334*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MVQLKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAS VLMCGRNAKT 60 NFPVPLNPDG DAGAAHGSSK AALSEVLSAK LRKCCKATPS PSLTCLRLDT EKSHIGVWQK 120 RAGTRADSSW VLTVELGNEA VEMVDDEERV ALQMIEELLS RNRPSQASHA GEDGFFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 8e-75 | ERF family protein |