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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW26060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 247aa MW: 27276.4 Da PI: 6.4191 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49 | 1.4e-15 | 14 | 69 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT...........-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...........tWktIartmgkgRtlkqcksrwqk 46 +g+W++eEd +l+ ++++ G+g W+ Ia+ ++ gRt++++k++w++ RWW26060.1 14 KGPWSPEEDAKLKAYIEENGTGgnwialphkigLWSIIAAQLP-GRTDNDVKNYWNT 69 79*****************************************.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE ENGTGGNWIA LPHKIGLWSI IAAQLPGRTD 60 NDVKNYWNTK LQKKLFGKRK ERHLHLNRVP ILPASALERM QLQGLLNSPF SFCGNPEPWP 120 KHQPPGDRSI LASISTDSTH QAGFQMRSGI LKSETASTRG EVERSALGFH SASTGGSLSV 180 ETSTSSFNAV TAVDVQADEL DDLLYCNHSF AGHQEHDRWW IADGFEDESR MVSWDSAAAL 240 GSQEYDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 8e-45 | MYB family protein |