PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW25307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 21426.8 Da PI: 5.9515 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.7e-19 | 82 | 132 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + + r++lg+f ta+eAa+a+++a+ +++g RWW25307.1 82 RYRGVRQRP-WGKFAAEIRDP---NrRGSRIWLGTFSTAFEAARAYDRAAFRMRG 132 7********.**********9...4334*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MEHHPDVDDF STLDFLPHQL LDADFDPLLA DLPPSSTPPP LHYAAVEPTR SMPLPSAPLA 60 ESWPQESAGV SSEAEDQAVG RRYRGVRQRP WGKFAAEIRD PNRRGSRIWL GTFSTAFEAA 120 RAYDRAAFRM RGCRAILNFP NEVGRFERRH TRVADDEVGV GRDGGVGDGE CGGAAGIEGG 180 RRPEGNPFGV QLHRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47230.1 | 9e-23 | ERF family protein |