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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW21487.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 207aa MW: 22581.4 Da PI: 4.505 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 80 | 130 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + + +r++lg+f+ ae Aa a+++a+++++g RWW21487.1 80 SYRGVRKRP-WGKFAAEIRDSTR---QgARVWLGTFDNAEAAALAYDQAALAMRG 130 69*******.**********322...24*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MDSPNLYFRS SESSAASTPE SPDPSPCSRI DQPLLFDVND ADEMLLLDTL MDAPDVSDST 60 MAVEEVGSSV TAEPQGCEKS YRGVRKRPWG KFAAEIRDST RQGARVWLGT FDNAEAAALA 120 YDQAALAMRG TAAVLNFPAE RVRASLRDLE LVGVDGCSPV LALKKMHCIR KRRTSGSKVR 180 ESVVVLEDLG AEYLEELLRL SDPASPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 1e-47 | ERF family protein |