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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW21103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 26562.4 Da PI: 6.3589 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.6e-18 | 61 | 112 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ykGVr++ grWv+e+r+p +k++r++lg+f tae+Aa+a++ a+ l+g RWW21103.1 61 PVYKGVRRRGAAGRWVCEVREP---NKKTRIWLGTFPTAEMAARAHDVAAMMLRG 112 68****************9998...347***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
ATAEHLSFRM DTFYGGDGAA ASSGSSSGSP SSGETWLYST VSQAPPKRPA GRTKFRETRH 60 PVYKGVRRRG AAGRWVCEVR EPNKKTRIWL GTFPTAEMAA RAHDVAAMML RGRSACLNFA 120 DSAWRLRVPP SFSSSRDIAR AAAEAAEAFR PSSHSSGGAA SPLMTESSAH ASLSLPTTAT 180 PPPTSPEEGA GSDSYRGGAF DMINYDDMDL GYCYYSSMAE ELLVEPPLYN WDDVDAGADL 240 PLWSYSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 8e-46 | ERF family protein |